Extension of MCMCDiagnosticTools
The following methods of MCMCDiagnosticTools.jl are extended by this package.
MCMCDiagnosticTools.bfmiMCMCDiagnosticTools.ess_rhatMCMCDiagnosticTools.mcseMCMCDiagnosticTools.rstar
MCMCDiagnosticTools.bfmi — Methodbfmi(data::InferenceData) -> DimArray
bfmi(sample_stats::Dataset) -> DimArrayCalculate the chainwise estimated Bayesian fraction of missing information (BFMI).
See MCMCDiagnosticTools.bfmi for more details.
MCMCDiagnosticTools.ess_rhat — Methodess_rhat(data::InferenceData; kwargs...) -> Dataset
ess_rhat(data::Dataset; kwargs...) -> DatasetCalculate the effective sample size (ESS) and $\widehat{R}$ diagnostic for each parameter in the data.
For more details and a description of the kwargs, see MCMCDiagnosticTools.ess_rhat.
MCMCDiagnosticTools.mcse — Methodmcse(data::InferenceData; kwargs...) -> Dataset
mcse(data::Dataset; kwargs...) -> DatasetCalculate the Monte Carlo standard error (MCSE) for each parameter in the data.
For more details and a description of the kwargs, see MCMCDiagnosticTools.mcse.
MCMCDiagnosticTools.rstar — Methodrstar(
rng::Random.AbstractRNG=Random.default_rng(),
classifier,
data::Union{InferenceData,Dataset};
kwargs...,
)Calculate the $R^*$ diagnostic for the data.
For a description of the classifier and kwargs, see MCMCDiagnosticTools.rstar.